Research map: Microbially derived glutathione from Eubacterium rectale alleviates oxidative stress and promotes intestinal epithelial recovery
Back to the article
Papers in this map
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
· Michael I. Love · 2014 · 104531 citations · Cited by this paper
Comprehensive analyses of archaeal viral genomes reveal genomic characteristics, divergence, and host interactions
· 2026 · Related
Trimmomatic: a flexible trimmer for Illumina sequence data
· Anthony Bolger · 2014 · 71940 citations · Cited by this paper
Metabolic host-microbe crosstalk in stabilization of epithelial HIF
· 2026 · Related
Fast gapped-read alignment with Bowtie 2
· Ben Langmead · 2012 · 62901 citations · Cited by this paper
Gardnerella piotii enhances uropathogenic Escherichia coli infection through a succinate–GPR91–uroplakin axis
· 2026 · Related
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
· Yang Liao · 2013 · 30442 citations · Cited by this paper
Environmental reservoirs and transmission pathways of antimicrobial resistance across the pork production continuum
· 2026 · Related
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
· Bo Li · 2011 · 24061 citations · Cited by this paper
Helotiales fungi as potential nutritional partners for non-mycorrhizal plants: a machine learning and experimental approach
· 2026 · Related
Full-length transcriptome assembly from RNA-Seq data without a reference genome
· Manfred G. Grabherr · 2011 · 23052 citations · Cited by this paper
Dismissing-then-recruiting: a unique mechanism for symbiont recruitment and lignocellulose degradation in gut of black soldier fly larvae
· 2026 · Related
Twelve years of SAMtools and BCFtools
· Petr Danecek · 2021 · 17144 citations · Cited by this paper
The need for standardization and improved open (meta)data practices in metaproteomics
· 2026 · Related
Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype
· Daehwan Kim · 2019 · 16606 citations · Cited by this paper
The impact of western versus agrarian diet consumption on gut microbiome composition and immune dysfunction in people living with HIV in rural and urban Zimbabwe
· 2026 · Related
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
· Mihaela Pertea · 2015 · 16111 citations · Cited by this paper
Context-dependent effects of antimicrobial coatings on microbial load and bacterial community composition on public high-touch surfaces
· 2026 · Related
Prodigal: prokaryotic gene recognition and translation initiation site identification
· Doug Hyatt · 2010 · 13723 citations · Cited by this paper
Reconstructing community dynamics from limited observations
· 2026 · Related
MultiQC: summarize analysis results for multiple tools and samples in a single report
· Philip Ewels · 2016 · 11140 citations · Cited by this paper
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
· Dinghua Li · 2015 · 10555 citations · Cited by this paper
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
· Johan Goris · 2007 · 4930 citations · Cited by this paper
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
· Daniel N. Frank · 2007 · 4671 citations · Cited by this paper
Interleukin-10-deficient mice develop chronic enterocolitis
· Ralf Kühn · 1993 · 4325 citations · Cited by this paper
mixOmics: An R package for ‘omics feature selection and multiple data integration
· Florian Rohart · 2017 · 4123 citations · Cited by this paper
Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43
· Kendle M. Maslowski · 2009 · 3290 citations · Cited by this paper
Binning metagenomic contigs by coverage and composition
· Johannes Alneberg · 2014 · 3127 citations · Cited by this paper
RSeQC: quality control of RNA-seq experiments
· Liguo Wang · 2012 · 3127 citations · Cited by this paper
Role of the normal gut microbiota
· Sai Manasa Jandhyala · 2015 · 3079 citations · Cited by this paper
Glutathione: Overview of its protective roles, measurement, and biosynthesis
· Henry Jay Forman · 2008 · 2646 citations · Cited by this paper
Bifidobacteria can protect from enteropathogenic infection through production of acetate
· Shinji Fukuda · 2011 · 2426 citations · Cited by this paper
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
· Konstantin Okonechnikov · 2015 · 2402 citations · Cited by this paper
The Firmicutes/Bacteroidetes Ratio: A Relevant Marker of Gut Dysbiosis in Obese Patients?
· Fabien Magne · 2020 · 2368 citations · Cited by this paper
Anvi’o: an advanced analysis and visualization platform for ‘omics data
· A. Murat Eren · 2015 · 2124 citations · Cited by this paper
KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score threshold
· Takuya Aramaki · 2019 · 2097 citations · Cited by this paper
Gut microbiome structure and metabolic activity in inflammatory bowel disease
· Eric A. Franzosa · 2018 · 2095 citations · Cited by this paper
The Controversial Role of Human Gut Lachnospiraceae
· Mirco Vacca · 2020 · 1764 citations · Cited by this paper
Gut microbiota: Role in pathogen colonization, immune responses, and inflammatory disease
· Joseph M. Pickard · 2017 · 1755 citations · Cited by this paper
Source: OpenAlex (CC0)