Research map: Understanding metabolic interactions between bacteria and fungi for cross-kingdom consortia applications

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Papers in this map

  1. Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning · Cameron Wagg · 2019 · 1896 citations · Cited by this paper
  2. Potentials of Filamentous Fungi for the Second Generation of Bioethanol Production: Recent Advances, Enzymatic Strategies, and Biorefinery Integration · Mona Fatin Syazwanee Mohamed Ghazali · 2026 · Cites this paper
  3. The diverse effects of stress in cross-feeding systems · 2026 · Related
  4. Discovery of microbial natural products by activation of silent biosynthetic gene clusters · Peter J. Rutledge · 2015 · 1018 citations · Cited by this paper
  5. Editorial overview: Defined communities provide a window into microbial metabolic interactions · James B. McKinlay · 2026 · Cites this paper
  6. The unusual suspects: the role of extracellular vesicles in host/pathogens interactions · 2026 · Related
  7. Bacterial–fungal interactions: ecology, mechanisms and challenges · Aurélie Deveau · 2018 · 827 citations · Cited by this paper
  8. Common sensor and diverse effectors: regulation of bacterial antiphage immunity by retron systems · 2026 · Related
  9. Intimate bacterial–fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans · Volker Schroeckh · 2009 · 670 citations · Cited by this paper
  10. Lipid-pathogen interactions: sphingolipids in Chlamydia trachomatis infection · 2026 · Related
  11. Bacillus subtilis biofilm formation and social interactions · Sofia Arnaouteli · 2021 · 555 citations · Cited by this paper
  12. When a protozoan pathogen imitates cancer · 2026 · Related
  13. Trichoderma: a multipurpose, plant-beneficial microorganism for eco-sustainable agriculture · Sheridan Lois Woo · 2022 · 520 citations · Cited by this paper
  14. Hedging their bets: how bacterial pathogens diversify to survive infection · 2026 · Related
  15. The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria · Olaf Tyc · 2016 · 510 citations · Cited by this paper
  16. B vitamin-mediated interactions in synthetic microbial communities · 2026 · Related
  17. Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation · Hans‐Wilhelm Nützmann · 2011 · 342 citations · Cited by this paper
  18. The polar landscape of bacterial pathogens and predators · 2026 · Related
  19. Cross-kingdom nutrient exchange in the plant–arbuscular mycorrhizal fungus–bacterium continuum · Shilong Duan · 2024 · 262 citations · Cited by this paper
  20. Beyond the protein lattice: bacterial S-layer glycans — from structure to functional frontier · 2026 · Related
  21. Control of Candida albicans Metabolism and Biofilm Formation by Pseudomonas aeruginosa Phenazines · Diana K. Morales · 2013 · 254 citations · Cited by this paper
  22. Mutations in RNA polymerase that drive the emergence of antibiotic resistance · 2026 · Related
  23. Combined use of Trichoderma and beneficial bacteria (mainly Bacillus and Pseudomonas): Development of microbial synergistic bio-inoculants in sustainable agriculture · Jorge Poveda · 2022 · 174 citations · Cited by this paper
  24. Fusarium fruiting body microbiome member Pantoea agglomerans inhibits fungal pathogenesis by targeting lipid rafts · Sunde Xu · 2022 · 165 citations · Cited by this paper
  25. Antifungal mechanisms by which a novel Pseudomonas aeruginosa phenazine toxin kills Candida albicans in biofilms · Diana K. Morales · 2010 · 158 citations · Cited by this paper
  26. Bacterial–fungal interactions revealed by genome-wide analysis of bacterial mutant fitness · Emily C. Pierce · 2020 · 147 citations · Cited by this paper
  27. Co-cultivation of Trichoderma asperellum GDFS1009 and Bacillus amyloliquefaciens 1841 Causes Differential Gene Expression and Improvement in the Wheat Growth and Biocontrol Activity · Valliappan Karuppiah · 2019 · 140 citations · Cited by this paper
  28. Composing a microbial symphony: synthetic communities for promoting plant growth · Xinming Xu · 2025 · 136 citations · Cited by this paper
  29. Microbial interactions trigger the production of antibiotics · Tina Netzker · 2018 · 130 citations · Cited by this paper
  30. Emission Factors of Microbial Volatile Organic Compounds from Environmental Bacteria and Fungi · Pawel K. Misztal · 2018 · 118 citations · Cited by this paper
  31. Community standards and future opportunities for synthetic communities in plant–microbiota research · Trent R. Northen · 2024 · 113 citations · Cited by this paper
  32. Bacterial endosymbionts protect beneficial soil fungus from nematode attack · Hannah Büttner · 2021 · 106 citations · Cited by this paper
  33. Volatile organic compound patterns predict fungal trophic mode and lifestyle · Yuan Guo · 2021 · 102 citations · Cited by this paper
  34. Microbial secondary metabolites: advancements to accelerate discovery towards application · Jaime Lorenzo N. Dinglasan · 2025 · 102 citations · Cited by this paper
  35. Co-culture of Bacillus amyloliquefaciens ACCC11060 and Trichoderma asperellum GDFS1009 enhanced pathogen-inhibition and amino acid yield · Qiong Wu · 2018 · 101 citations · Cited by this paper
  36. Symbiotic Cooperation in the Biosynthesis of a Phytotoxin · Kirstin Scherlach · 2012 · 88 citations · Cited by this paper
  37. Division of labor for substrate utilization in natural and synthetic microbial communities · Razieh Rafieenia · 2022 · 85 citations · Cited by this paper
  38. Chemical Mediators at the Bacterial-Fungal Interface · Kirstin Scherlach · 2020 · 84 citations · Cited by this paper
  39. The co-inoculation of Trichoderma viridis and Bacillus subtilis improved the aerobic composting efficiency and degradation of lignocellulose · Shancong Wang · 2024 · 81 citations · Cited by this paper

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