Research map: Exploiting genomics to mitigate the public health impact of antimicrobial resistance

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  1. Origins and Evolution of Antibiotic Resistance · JULIAN E. DAVIES · 2010 · 5887 citations · Cited by this paper
  2. The burden of bacterial antimicrobial resistance in the WHO African region in 2019: a cross-country systematic analysis · Benn K. D. Sartorius · 2023 · 352 citations · Cites this paper
  3. Advancing One Health genomics in Africa: opportunities and challenges for outbreak and antimicrobial resistance control · 2026 · Related
  4. Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study · Yiyun Liu · 2015 · 5515 citations · Cited by this paper
  5. Using Machine Learning to Predict Antimicrobial Resistance―A Literature Review · Aikaterini Sakagianni · 2023 · 180 citations · Cites this paper
  6. Transcriptome signatures for the identification of bevacizumab responders in ovarian cancer · 2026 · Related
  7. Attributable deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in the EU and the European Economic Area in 2015: a population-level modelling analysis · Alessandro Cassini · 2018 · 3030 citations · Cited by this paper
  8. Current Uses and Future Perspectives of Genomic Technologies in Clinical Microbiology · Irene Bianconi · 2023 · 126 citations · Cites this paper
  9. Circulating tumor DNA precision oncology enables effective and sensitive molecular diagnostics and actionable target detection in pediatric solid tumors - the INFORM experience · 2026 · Related
  10. Mobile Genetic Elements Associated with Antimicrobial Resistance · Sally R. Partridge · 2018 · 2805 citations · Cited by this paper
  11. Antimicrobial Stewardship in the Hospital Setting: A Narrative Review · Helen Giamarellou · 2023 · 80 citations · Cites this paper
  12. Integrative stratification of response to immunotherapy using host and microbial signatures in patients with advanced non-small cell lung cancer · 2026 · Related
  13. Characterization of a New Metallo-β-Lactamase Gene, bla NDM-1 , and a Novel Erythromycin Esterase Gene Carried on a Unique Genetic Structure in Klebsiella pneumoniae Sequence Type 14 from India · Dongeun Yong · 2009 · 2546 citations · Cited by this paper
  14. Innovations in genomic antimicrobial resistance surveillance · Nicole E. Wheeler · 2023 · 75 citations · Cites this paper
  15. Cell type-specific contextualisation of the human phenome: towards the systematic treatment of all rare diseases · 2026 · Related
  16. Mechanisms of, and Barriers to, Horizontal Gene Transfer between Bacteria · Christopher Morton Thomas · 2005 · 2263 citations · Cited by this paper
  17. Artificial intelligence applications in the diagnosis and treatment of bacterial infections · Xiaoyu Zhang · 2024 · 65 citations · Cites this paper
  18. Long-read transcriptome sequencing and Drosophila-based functional validation reveal novel gene fusions in fusion panel-negative gliomas · 2026 · Related
  19. Novel Carbapenem-Hydrolyzing β-Lactamase, KPC-1, from a Carbapenem-Resistant Strain of Klebsiella pneumoniae · Hesna Yigit · 2001 · 1654 citations · Cited by this paper
  20. Artificial intelligence in predicting pathogenic microorganisms’ antimicrobial resistance: challenges, progress, and prospects · Yan Li · 2024 · 65 citations · Cites this paper
  21. Comprehensive genomic characterization of extraintestinal pathogenic Escherichia coli isolated from neonates: multiple center insights into virulence, resistance, and transmission dynamics · 2026 · Related
  22. Emergence of Oxacillinase-Mediated Resistance to Imipenem inKlebsiella pneumoniae · Laurent Poirel · 2003 · 1001 citations · Cited by this paper
  23. Next-generation sequencing and PCR technologies in monitoring the hospital microbiome and its drug resistance · Carolina Cason · 2022 · 53 citations · Cites this paper
  24. Infiltrating monocyte-derived macrophages does not survive long term in stroke brain despite their dominance in the acute ischemic core and myeloid derived IGF-1 play dichotomous roles in stroke recovery · 2026 · Related
  25. Whole genome sequencing options for bacterial strain typing and epidemiologic analysis based on single nucleotide polymorphism versus gene-by-gene–based approaches · Anita C. Schürch · 2018 · 542 citations · Cited by this paper
  26. In-depth characterization of food and environmental microbiomes across different meat processing plants · Coral Barcenilla · 2024 · 52 citations · Cites this paper
  27. Resistome, virulome and mobilome of clinical carbapenemase-producing Acinetobacter baumannii strains isolated in Togo · 2026 · Related
  28. Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae · Frank R. DeLeo · 2014 · 349 citations · Cited by this paper
  29. An insights into emerging trends to control the threats of antimicrobial resistance (AMR): an address to public health risks · Ayesha Asghar · 2024 · 50 citations · Cites this paper
  30. Pathogenomics of multidrug-resistant Escherichia coli from bloodstream infections in South Africa · 2026 · Related
  31. Integrated Multilevel Surveillance of the World's Infecting Microbes and Their Resistance to Antimicrobial Agents · Thomas F O’Brien · 2011 · 82 citations · Cited by this paper
  32. Genomic analysis of almost 8,000 Salmonella genomes reveals drivers and landscape of antimicrobial resistance in China · Yanan Wang · 2023 · 48 citations · Cites this paper
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  34. Factors associated with plasmid antibiotic resistance gene carriage revealed using large-scale multivariable analysis · Alex Orlek · 2023 · 44 citations · Cites this paper
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  36. A comprehensive review on genomics, systems biology and structural biology approaches for combating antimicrobial resistance in ESKAPE pathogens: computational tools and recent advancements · P. Priyamvada · 2022 · 39 citations · Cites this paper
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  38. Enterococcus species: insights into antimicrobial resistance and whole-genome features of isolates recovered from livestock and raw meat in Ghana · Grebstad Rabbi Amuasi · 2023 · 35 citations · Cites this paper
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