Research map: Precision microbiome medicine and therapeutics: the enabling role of in vitro gut models

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  1. Diversity, stability and resilience of the human gut microbiota · Catherine Lozupone · 2012 · 5737 citations · Cited by this paper
  2. Role of the LuxR solo, SdiA, in eavesdropping on foreign bacteria · 2025 · Related
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  11. Gut microbiota-derived metabolites as key actors in inflammatory bowel disease · Aonghus Lavelle · 2020 · 2067 citations · Cited by this paper
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  13. Extensive impact of non-antibiotic drugs on human gut bacteria · Lisa A. Maier · 2018 · 2016 citations · Cited by this paper
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  15. Personalized Gut Mucosal Colonization Resistance to Empiric Probiotics Is Associated with Unique Host and Microbiome Features · Niv Zmora · 2018 · 1717 citations · Cited by this paper
  16. The resilient microbiome: how baseline gut microbial composition influences response to cancer treatment · 2026 · Related
  17. Human organs-on-chips for disease modelling, drug development and personalized medicine · Donald E. Ingber · 2022 · 1562 citations · Cited by this paper
  18. Evolutionary mechanisms underlying bacterial adaptation to the plant environment · 2026 · Related
  19. Short-chain fatty acids: linking diet, the microbiome and immunity · Elizabeth R. Mann · 2024 · 1496 citations · Cited by this paper
  20. Look and you will find—a literature review of new strains of Leptospira spp., 2000–2025 · 2025 · Related
  21. Strains, functions and dynamics in the expanded Human Microbiome Project · Jason Lloyd‐Price · 2017 · 1404 citations · Cited by this paper
  22. Gut-microbiota-targeted diets modulate human immune status · Hannah Constance Wastyk · 2021 · 1378 citations · Cited by this paper
  23. Precision Medicine — Personalized, Problematic, and Promising · J. Larry Jameson · 2015 · 1117 citations · Cited by this paper
  24. Microbial Regulation of Host Physiology by Short-chain Fatty Acids · Bart van der Hee · 2021 · 1009 citations · Cited by this paper
  25. Probiotics and the gut microbiota in intestinal health and disease · Mélanie G. Gareau · 2010 · 932 citations · Cited by this paper
  26. Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip · Hyun Jung Kim · 2015 · 921 citations · Cited by this paper
  27. Fecal Microbiota Transplantation for Clostridium difficile Infection: Systematic Review and Meta-Analysis · Zain Kassam · 2013 · 909 citations · Cited by this paper
  28. A complex human gut microbiome cultured in an anaerobic intestine-on-a-chip · Sasan Jalili‐Firoozinezhad · 2019 · 855 citations · Cited by this paper
  29. Human Gut Microbiome: Function Matters · Anna Heintz‐Buschart · 2017 · 806 citations · Cited by this paper
  30. Gut microbiome stability and resilience: elucidating the response to perturbations in order to modulate gut health · Marina Fassarella · 2020 · 805 citations · Cited by this paper
  31. Functional Redundancy-Induced Stability of Gut Microbiota Subjected to Disturbance · Andrés Moyá · 2016 · 717 citations · Cited by this paper
  32. Alcohol, liver disease and the gut microbiota · Jasmohan Singh Bajaj · 2019 · 709 citations · Cited by this paper
  33. A microfluidics-based in vitro model of the gastrointestinal human–microbe interface · Pranjul Shah · 2016 · 667 citations · Cited by this paper
  34. Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort · Youwen Qin · 2022 · 596 citations · Cited by this paper
  35. Faecalibacterium : a bacterial genus with promising human health applications · Rebeca Martín · 2023 · 555 citations · Cited by this paper
  36. Dysregulated Microbial Fermentation of Soluble Fiber Induces Cholestatic Liver Cancer · Vishal Singh · 2018 · 540 citations · Cited by this paper
  37. Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium · Sandrine Brugiroux · 2016 · 522 citations · Cited by this paper
  38. Personalized Mapping of Drug Metabolism by the Human Gut Microbiome · Bahar Javdan · 2020 · 496 citations · Cited by this paper
  39. Butyrate-producing bacteria supplemented in vitro to Crohn’s disease patient microbiota increased butyrate production and enhanced intestinal epithelial barrier integrity · Annelies Geirnaert · 2017 · 468 citations · Cited by this paper

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