Research map: TogoMCP: natural language querying of life-science knowledge graphs via schema-guided LLMs and the Model Context Protocol
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Gene Ontology: tool for the unification of biology
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· George Tsatsaronis · 2015 · 595 citations · Cited by this paper
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· Zheng, Lianmin · 2023 · 484 citations · Cited by this paper
GeneGPT: augmenting large language models with domain tools for improved access to biomedical information
· Qiao Jin · 2024 · 179 citations · Cited by this paper
Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures
· Akira R. Kinjo · 2016 · 151 citations · Cited by this paper
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· Eric Prud’hommeaux · 2014 · 132 citations · Cited by this paper
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· Shujiro Okuda · 2024 · 114 citations · Cited by this paper
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· Adrian Altenhoff · 2023 · 104 citations · Cited by this paper
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· Frederic Bastian · 2024 · 35 citations · Cited by this paper
BRENDA in 2026: a Global Core Biodata Resource for functional enzyme and metabolic data within the DSMZ Digital Diversity
· Julia Hauenstein · 2025 · 35 citations · Cited by this paper
NBDC RDF portal: a comprehensive repository for semantic data in life sciences
· Shuichi Kawashima · 2018 · 24 citations · Cited by this paper
TogoID: an exploratory ID converter to bridge biological datasets
· Shuya Ikeda · 2022 · 20 citations · Cited by this paper
Generating SPARQL from Natural Language Using Chain-of-Thoughts Prompting
· Hamada M. Zahera · 2024 · 20 citations · Cited by this paper
OLS4: a new Ontology Lookup Service for a growing interdisciplinary knowledge ecosystem
· James McLaughlin · 2025 · 19 citations · Cited by this paper
Genenames.org: the HGNC and PGNC resources in 2026
· Ruth L. Seal · 2025 · 17 citations · Cited by this paper
Ontology-grounded knowledge graphs for mitigating hallucinations in large language models for clinical question answering
· Mohamed Ali · 2026 · 15 citations · Cited by this paper
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· Adrian Altenhoff · 2023 · 14 citations · Cited by this paper
LLM-based SPARQL Query Generation from Natural Language over Federated Knowledge Graphs
· Vincent Emonet · 2024 · 7 citations · Cited by this paper
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· Sunmyoung Lee · 2024 · 4 citations · Cited by this paper
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· Charalampos Doulaverakis · 2025 · 4 citations · Cited by this paper
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